ElCondorcave.Cheng.2013 - v1.0.14

Dataset Id: 6TxYwrJNtmSCyhPWy0UV

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R code to load dataset:

L <- lipdR::readLipd("https://lipdverse.org/data/6TxYwrJNtmSCyhPWy0UV/1_0_14/ElCondorcave.Cheng.2013.lpd")

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SISAL-LiPD-2_0_1

SISAL-LiPD-2_0_0

root

archiveType: Speleothem

originalDataUrl: https://doi.org/10.17864/1947.256

lipdVersion: 1.3

pub
pub1

author: list(list(name = "Hai Cheng and Ashish Sinha and Francisco W. Cruz and Xianfeng Wang and R. Lawrence Edwards and Fernando M. d'Horta and Camila C. Ribas and Mathias Vuille and Lowell D. Stott and Augusto S. Auler"))

journal: Nature Communications

title: Climate change patterns in Amazonia and biodiversity

doi: 10.1038/ncomms2415

geo

latitude: -5.93

longitude: -77.3

elevation: 860

siteName: El Condor cave

PaleoData columns
age (yr BP) [1-1]

TSid: S2LRhWuxpE4aLG

variableName: age

units: yr BP

description: Original published calibrated age of the sample in years BP

sampleID (unitless) [1-1]

TSid: S2LRe4Wg6veslS

variableName: sampleID

units: unitless

description: Refers to the unique identifier for the sample (as given in sample table)

interpretation
1

scope: climate

mineralogy (unitless) [1-1]

TSid: S2LRrIUJlRLZmu

variableName: mineralogy

units: unitless

description: Description of the mineralogy of the sample

interpretation
1

scope: climate

correction (unitless) [1-1]

TSid: S2LRN9bwDxmr5B

variableName: correction

units: unitless

description: Indication of whether the isotope measurements have been corrected in aragonite samples

interpretation
1

scope: climate

d18O (permil) [1-1]

TSid: S2LRkEnqD4DSWM

variableName: d18O

units: permil

description: Original d18O measurement

interpretation
1

scope: climate

uncertainty (permil) [1-1]

TSid: S2LR9bTGyiNAoX

variableName: uncertainty

units: permil

description: Laboratory precision on the d18O measurement

interpretation
1

scope: climate

uncertainty (unitless) [1-1]

TSid: S2LRj5uidDwZfw

variableName: uncertainty

units: unitless

description: Description of isotopic standard used

interpretation
1

scope: climate

depth (mm) [1-2]

TSid: S2LRiWPSECatGf

variableName: depth

units: mm

description: Distance in mm from a reference point

age (yr BP) [1-2]

TSid: S2LRHoxKUzUT3r

variableName: age

units: yr BP

description: Original published calibrated age of the sample in years BP

age (yr BP) [1-2]

TSid: S2LRaRhV57h1k5

variableName: age

units: yr BP

description: Calendar age in years BP, method = Bchron

age (yr BP) [1-2]

TSid: S2LRbKKZGqLF4n

variableName: age

units: yr BP

description: Calendar age in years BP, method = Bacon

age (yr BP) [1-2]

TSid: S2LRh2KIC43TQy

variableName: age

units: yr BP

description: Calendar age in years BP, method = OxCal

sampleID (unitless) [1-2]

TSid: S2LRaGTXNeSm4w

variableName: sampleID

units: unitless

description: Refers to the unique identifier for the sample (as given in sample table)

interpretation
1

scope: climate

mineralogy (unitless) [1-2]

TSid: S2LR7CSlXSHtBN

variableName: mineralogy

units: unitless

description: Description of the mineralogy of the sample

interpretation
1

scope: climate

correction (unitless) [1-2]

TSid: S2LRWdmJkXXmiO

variableName: correction

units: unitless

description: Indication of whether the isotope measurements have been corrected in aragonite samples

interpretation
1

scope: climate

d18O (permil) [1-2]

TSid: S2LRLfv6iCnPNE

variableName: d18O

units: permil

description: Original d18O measurement

interpretation
1

direction: negative

seasonality: Dec-Feb

variable: precipitation

variableDetail: amount@surface

seasonalityGeneral: Summer

scope: climate

variableGroup: P

uncertainty (permil) [1-2]

TSid: S2LRFCAmNDpuD5

variableName: uncertainty

units: permil

description: Laboratory precision on the d18O measurement

interpretation
1

scope: climate

uncertainty (unitless) [1-2]

TSid: S2LRD7hxrzXH63

variableName: uncertainty

units: unitless

description: Description of isotopic standard used

interpretation
1

scope: climate

d13C (permil) [1-2]

TSid: S2LRqLfFOdyQE7

variableName: d13C

units: permil

description: Original d13C measurement

interpretation
1

scope: climate

uncertainty (permil) [1-2]

TSid: S2LRvTdq8nBkUk

variableName: uncertainty

units: permil

description: Laboratory precision on the d13C measurement

interpretation
1

scope: climate

uncertainty (unitless) [1-2]

TSid: S2LRgXQDa7uv7W

variableName: uncertainty

units: unitless

description: Description of isotopic standard used

interpretation
1

scope: climate

uncertaintyHigh (yr BP) [1-2]

TSid: S2LRgrwXZdQ62e

variableName: uncertaintyHigh

units: yr BP

description: Positive age uncertaintyin years BP, method = Bchron

interpretation
1

scope: climate

uncertaintyLow (yr BP) [1-2]

TSid: S2LRY87QM7D02l

variableName: uncertaintyLow

units: yr BP

description: Negative age uncertaintyin years BP, method = Bchron

interpretation
1

scope: climate

uncertaintyHigh (yr BP) [1-2]

TSid: S2LR6iqYbBrpKs

variableName: uncertaintyHigh

units: yr BP

description: Positive age uncertaintyin years BP, method = Bacon

interpretation
1

scope: climate

uncertaintyLow (yr BP) [1-2]

TSid: S2LR54KJPDWfFH

variableName: uncertaintyLow

units: yr BP

description: Negative age uncertaintyin years BP, method = Bacon

interpretation
1

scope: climate

uncertaintyHigh (yr BP) [1-2]

TSid: S2LRk9OygzG2Gt

variableName: uncertaintyHigh

units: yr BP

description: Positive age uncertaintyin years BP, method = OxCal

interpretation
1

scope: climate

uncertaintyLow (yr BP) [1-2]

TSid: S2LRjfA1KE4glI

variableName: uncertaintyLow

units: yr BP

description: Negative age uncertaintyin years BP, method = OxCal

interpretation
1

scope: climate

depth (mm) [1-3]

TSid: S2LRRDQVxdXd3C

variableName: depth

units: mm

description: Distance in mm from a reference point

age (yr BP) [1-3]

TSid: S2LRUvqjVPSzug

variableName: age

units: yr BP

description: Original published calibrated age of the sample in years BP

age (yr BP) [1-3]

TSid: S2LRQIf1dTeKR0

variableName: age

units: yr BP

description: Calendar age in years BP, method = Bchron

age (yr BP) [1-3]

TSid: S2LRAWJtj56Ypm

variableName: age

units: yr BP

description: Calendar age in years BP, method = Bacon

age (yr BP) [1-3]

TSid: S2LRZJr2zLr3ei

variableName: age

units: yr BP

description: Calendar age in years BP, method = OxCal

sampleID (unitless) [1-3]

TSid: S2LRwY6xM41DC0

variableName: sampleID

units: unitless

description: Refers to the unique identifier for the sample (as given in sample table)

interpretation
1

scope: climate

mineralogy (unitless) [1-3]

TSid: S2LRXgbM3Qhhig

variableName: mineralogy

units: unitless

description: Description of the mineralogy of the sample

interpretation
1

scope: climate

correction (unitless) [1-3]

TSid: S2LRSGJ5S5rD5M

variableName: correction

units: unitless

description: Indication of whether the isotope measurements have been corrected in aragonite samples

interpretation
1

scope: climate

d18O (permil) [1-3]

TSid: S2LRcMafCoSS3V

variableName: d18O

units: permil

description: Original d18O measurement

interpretation
1

direction: negative

seasonality: Dec-Feb

variable: precipitation

variableDetail: amount@surface

seasonalityGeneral: Summer

scope: climate

variableGroup: P

uncertainty (permil) [1-3]

TSid: S2LR44JpcpMJdv

variableName: uncertainty

units: permil

description: Laboratory precision on the d18O measurement

interpretation
1

scope: climate

uncertainty (unitless) [1-3]

TSid: S2LR8Rnq01l3a4

variableName: uncertainty

units: unitless

description: Description of isotopic standard used

interpretation
1

scope: climate

d13C (permil) [1-3]

TSid: S2LR8rEIhEHXpC

variableName: d13C

units: permil

description: Original d13C measurement

interpretation
1

scope: climate

uncertainty (permil) [1-3]

TSid: S2LRdCjOF6r6Jh

variableName: uncertainty

units: permil

description: Laboratory precision on the d13C measurement

interpretation
1

scope: climate

uncertainty (unitless) [1-3]

TSid: S2LRNyPfps3FKy

variableName: uncertainty

units: unitless

description: Description of isotopic standard used

interpretation
1

scope: climate

uncertaintyHigh (yr BP) [1-3]

TSid: S2LRZJZ1y4Itgc

variableName: uncertaintyHigh

units: yr BP

description: Positive age uncertaintyin years BP, method = Bchron

interpretation
1

scope: climate

uncertaintyLow (yr BP) [1-3]

TSid: S2LRaKLDOfr6vk

variableName: uncertaintyLow

units: yr BP

description: Negative age uncertaintyin years BP, method = Bchron

interpretation
1

scope: climate

uncertaintyHigh (yr BP) [1-3]

TSid: S2LRtJ3WsWWJLY

variableName: uncertaintyHigh

units: yr BP

description: Positive age uncertaintyin years BP, method = Bacon

interpretation
1

scope: climate

uncertaintyLow (yr BP) [1-3]

TSid: S2LRsujj7FDur8

variableName: uncertaintyLow

units: yr BP

description: Negative age uncertaintyin years BP, method = Bacon

interpretation
1

scope: climate

uncertaintyHigh (yr BP) [1-3]

TSid: S2LRLLGqiOnkAH

variableName: uncertaintyHigh

units: yr BP

description: Positive age uncertaintyin years BP, method = OxCal

interpretation
1

scope: climate

uncertaintyLow (yr BP) [1-3]

TSid: S2LRqcocDJURB5

variableName: uncertaintyLow

units: yr BP

description: Negative age uncertaintyin years BP, method = OxCal

interpretation
1

scope: climate

age (yr BP) [1-4]

TSid: S2LRIGvJMVAANw

variableName: age

units: yr BP

description: Original published calibrated age of the sample in years BP- All Stal composite, arranged by age, automatically by sisal2lipd. User beware.

sampleID (unitless) [1-4]

TSid: S2LRzv6aia8dA1

variableName: sampleID

units: unitless

description: Refers to the unique identifier for the sample (as given in sample table)- All Stal composite, arranged by age, automatically by sisal2lipd. User beware.

interpretation
1

scope: climate

mineralogy (unitless) [1-4]

TSid: S2LRxSuzamuKYN

variableName: mineralogy

units: unitless

description: Description of the mineralogy of the sample- All Stal composite, arranged by age, automatically by sisal2lipd. User beware.

interpretation
1

scope: climate

correction (unitless) [1-4]

TSid: S2LRr22Py5DRI7

variableName: correction

units: unitless

description: Indication of whether the isotope measurements have been corrected in aragonite samples- All Stal composite, arranged by age, automatically by sisal2lipd. User beware.

interpretation
1

scope: climate

d18O (permil) [1-4]

TSid: S2LReUx5jbNbgq

variableName: d18O

units: permil

description: Original d18O measurement- All Stal composite, arranged by age, automatically by sisal2lipd. User beware.

interpretation
1

direction: negative

seasonality: Dec-Feb

variableDetail: amount@surface

seasonalityGeneral: Summer

scope: climate

uncertainty (permil) [1-4]

TSid: S2LRa0LCNOGP9m

variableName: uncertainty

units: permil

description: Laboratory precision on the d18O measurement- All Stal composite, arranged by age, automatically by sisal2lipd. User beware.

interpretation
1

scope: climate

uncertainty (unitless) [1-4]

TSid: S2LRHun8m7gF8A

variableName: uncertainty

units: unitless

description: Description of isotopic standard used- All Stal composite, arranged by age, automatically by sisal2lipd. User beware.

interpretation
1

scope: climate

notes (unitless) [1-4]

TSid: S2LRp2FX8ve96a

variableName: notes

units: unitless

description: Entity (stal) names in the composite. Typically names a physical specimen upon which the sample was measured.

interpretation
1

scope: climate

ChronData columns
depth (depth_sample) [1-1]

TSid: S2LcRBhlACnpla7

variableName: depth

units: depth_sample

description: Distance in mm from a reference point

sisalDatingId (unitless) [1-1]

TSid: S2LcRVsHGhWMfxe

variableName: sisalDatingId

units: unitless

description: Unique identifier for each date

labID (unitless) [1-1]

TSid: S2LcRBdQVR0v6FR

variableName: labID

units: unitless

description: The laboratory number of the dated sample

materialDated (unitless) [1-1]

TSid: S2LcRPisrs1ypgQ

variableName: materialDated

units: unitless

description: Mineralogy of the dated sample

ageUncorr (yr BP) [1-1]

TSid: S2LcRI7ThaLJfdj

variableName: ageUncorr

units: yr BP

description: Uncorrected age of the dated sample in years

ageUncorrUncertaintyHi (yr BP) [1-1]

TSid: S2LcRDlpgipie3a

variableName: ageUncorrUncertaintyHi

units: yr BP

description: Positive uncertainty of the uncorrected age of the dated sample in years

ageUncorrUncertaintyLow (yr BP) [1-1]

TSid: S2LcRuOJAXCDUAf

variableName: ageUncorrUncertaintyLow

units: yr BP

description: Negative uncertainty of the uncorrected age of the dated sample in years

retained (unitless) [1-1]

TSid: S2LcRPw0Nec0OPU

variableName: retained

units: unitless

description: Indication of whether the date is used in the original age model (opposite of rejected)

U238 (ppb) [1-1]

TSid: S2LcRlRKtJjakxh

variableName: U238

units: ppb

description: 238U content of the dated sample in ppb

U238Uncertainty (ppb) [1-1]

TSid: S2LcR8pAh6LcLqJ

variableName: U238Uncertainty

units: ppb

description: 238U 2-sigma uncertainty of dated sample in ppb

Th232 (ppt) [1-1]

TSid: S2LcRN9MNrsA9Fw

variableName: Th232

units: ppt

description: 232Th content of the dated sample in ppt

Th232Uncertainty (ppt) [1-1]

TSid: S2LcRwOrObOu1nP

variableName: Th232Uncertainty

units: ppt

description: 232Th 2-sigma uncertainty of the dated sample in ppt

Th230/Th232 (unitless) [1-1]

TSid: S2LcR5EjnaGBk2H

variableName: Th230/Th232

units: unitless

description: 230Th/232Th activity ratio of the dated sample

Th230/Th232Uncertainty (unitless) [1-1]

TSid: S2LcRHIie2tdXxy

variableName: Th230/Th232Uncertainty

units: unitless

description: 230Th/232Th activity ratio 2-sigma uncertainty of the dated sample

Th230/U238 (unitless) [1-1]

TSid: S2LcReskUecl3ci

variableName: Th230/U238

units: unitless

description: 230Th/238U activity ratio of the dated sample

Th230/U238Uncertainty (unitless) [1-1]

TSid: S2LcRQWefWSJZF5

variableName: Th230/U238Uncertainty

units: unitless

description: 230Th/238U activity ratio 2-sigma uncertainty of the dated sample

U234/U238 (unitless) [1-1]

TSid: S2LcRAoOAOWn1gE

variableName: U234/U238

units: unitless

description: 234U/238U activity ratio of the dated sample

U234/U238Uncertainty (unitless) [1-1]

TSid: S2LcRDwhDo5j7Gd

variableName: U234/U238Uncertainty

units: unitless

description: 234U/238U activity ratio 2-sigma uncertainty of the dated sample

Th230/Th232Initial (unitless) [1-1]

TSid: S2LcR0hmutEqMge

variableName: Th230/Th232Initial

units: unitless

description: Initial 230Th/232Th activity ratio for the detrital correction

Th230/Th232InitialUncertainty (unitless) [1-1]

TSid: S2LcRkJqWyVHo5s

variableName: Th230/Th232InitialUncertainty

units: unitless

description: Initial 230Th/232Th activity ratio uncertainty for the detrital correction

decayConstant (unitless) [1-1]

TSid: S2LcREu0QtkavOo

variableName: decayConstant

units: unitless

description: Description of the half-life used for 230Th and 234U for U/Th samples

age (yr BP) [1-1]

TSid: S2LcRbc0wxlgRhB

variableName: age

units: yr BP

description: Corrected age of the dated sample in years

ageUncertaintyHigh (yr BP) [1-1]

TSid: S2LcRrq9xpgczDU

variableName: ageUncertaintyHigh

units: yr BP

description: Positive uncertainty of corrected age of the dated sample in years

ageUncertaintyLow (yr BP) [1-1]

TSid: S2LcRHNYXdk5NBP

variableName: ageUncertaintyLow

units: yr BP

description: Negative uncertainty of corrected age of the dated sample in years

age_type (unitless) [1-1]

TSid: S2LcRt2f00Sh9jv

variableName: age_type

units: unitless

description: broad class of age control

depth (depth_sample) [1-2]

TSid: S2LcRAeymAovKKa

variableName: depth

units: depth_sample

description: Distance in mm from a reference point

sisalDatingId (unitless) [1-2]

TSid: S2LcRezCHMTY0fO

variableName: sisalDatingId

units: unitless

description: Unique identifier for each date

labID (unitless) [1-2]

TSid: S2LcRcaAciXWiyE

variableName: labID

units: unitless

description: The laboratory number of the dated sample

materialDated (unitless) [1-2]

TSid: S2LcRp251wpzc2l

variableName: materialDated

units: unitless

description: Mineralogy of the dated sample

ageUncorr (yr BP) [1-2]

TSid: S2LcRJB45B3KmLu

variableName: ageUncorr

units: yr BP

description: Uncorrected age of the dated sample in years

ageUncorrUncertaintyHi (yr BP) [1-2]

TSid: S2LcR7urKlGmYoc

variableName: ageUncorrUncertaintyHi

units: yr BP

description: Positive uncertainty of the uncorrected age of the dated sample in years

ageUncorrUncertaintyLow (yr BP) [1-2]

TSid: S2LcRo6wpq7dWoP

variableName: ageUncorrUncertaintyLow

units: yr BP

description: Negative uncertainty of the uncorrected age of the dated sample in years

retained (unitless) [1-2]

TSid: S2LcR55DIGlmF78

variableName: retained

units: unitless

description: Indication of whether the date is used in the original age model (opposite of rejected)

U238 (ppb) [1-2]

TSid: S2LcRwWNjmamY8a

variableName: U238

units: ppb

description: 238U content of the dated sample in ppb

U238Uncertainty (ppb) [1-2]

TSid: S2LcRRV8y6NIZOY

variableName: U238Uncertainty

units: ppb

description: 238U 2-sigma uncertainty of dated sample in ppb

Th232 (ppt) [1-2]

TSid: S2LcRpsprVRs0Kb

variableName: Th232

units: ppt

description: 232Th content of the dated sample in ppt

Th232Uncertainty (ppt) [1-2]

TSid: S2LcRZbGUbyR2AQ

variableName: Th232Uncertainty

units: ppt

description: 232Th 2-sigma uncertainty of the dated sample in ppt

Th230/Th232 (unitless) [1-2]

TSid: S2LcRXWLzJD3vwY

variableName: Th230/Th232

units: unitless

description: 230Th/232Th activity ratio of the dated sample

Th230/Th232Uncertainty (unitless) [1-2]

TSid: S2LcRYxhycWcp2c

variableName: Th230/Th232Uncertainty

units: unitless

description: 230Th/232Th activity ratio 2-sigma uncertainty of the dated sample

Th230/U238 (unitless) [1-2]

TSid: S2LcRvcEsslL3R9

variableName: Th230/U238

units: unitless

description: 230Th/238U activity ratio of the dated sample

Th230/U238Uncertainty (unitless) [1-2]

TSid: S2LcR2VlxYXjO0Y

variableName: Th230/U238Uncertainty

units: unitless

description: 230Th/238U activity ratio 2-sigma uncertainty of the dated sample

U234/U238 (unitless) [1-2]

TSid: S2LcRCawhmKpMv8

variableName: U234/U238

units: unitless

description: 234U/238U activity ratio of the dated sample

U234/U238Uncertainty (unitless) [1-2]

TSid: S2LcRL7tDkEiDvP

variableName: U234/U238Uncertainty

units: unitless

description: 234U/238U activity ratio 2-sigma uncertainty of the dated sample

Th230/Th232Initial (unitless) [1-2]

TSid: S2LcR9IrrxtNr01

variableName: Th230/Th232Initial

units: unitless

description: Initial 230Th/232Th activity ratio for the detrital correction

Th230/Th232InitialUncertainty (unitless) [1-2]

TSid: S2LcRZXL16XzYA8

variableName: Th230/Th232InitialUncertainty

units: unitless

description: Initial 230Th/232Th activity ratio uncertainty for the detrital correction

decayConstant (unitless) [1-2]

TSid: S2LcRL5WMBFEEzB

variableName: decayConstant

units: unitless

description: Description of the half-life used for 230Th and 234U for U/Th samples

age (yr BP) [1-2]

TSid: S2LcRtoVv2ovOSQ

variableName: age

units: yr BP

description: Corrected age of the dated sample in years

ageUncertaintyHigh (yr BP) [1-2]

TSid: S2LcRDXmIL9kcj6

variableName: ageUncertaintyHigh

units: yr BP

description: Positive uncertainty of corrected age of the dated sample in years

ageUncertaintyLow (yr BP) [1-2]

TSid: S2LcRG6bBasuuv0

variableName: ageUncertaintyLow

units: yr BP

description: Negative uncertainty of corrected age of the dated sample in years

age_type (unitless) [1-2]

TSid: S2LcRvjoruTxDfK

variableName: age_type

units: unitless

description: broad class of age control